Organic Chemistry

Functional groups, stereochemistry, substitution/elimination, carbonyl chemistry, and spectroscopy

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Organic Chemistry for the MCAT

Functional Groups

Key functional groups to know:

  • Hydroxyl (-OH): Alcohols
  • Carbonyl (C=O): Aldehydes and ketones
  • Carboxyl (-COOH): Carboxylic acids
  • Amino (-NH₂): Amines
  • Thiol (-SH): Thiols

Stereochemistry

A chiral center has four different substituents. Assign R/S using Cahn-Ingold-Prelog priority rules.

  • Enantiomers: Non-superimposable mirror images (same physical properties, opposite optical rotation)
  • Diastereomers: Stereoisomers that are NOT mirror images (different physical properties)

Substitution & Elimination

| Reaction | Steps | Favored By | |----------|-------|------------| | SN1 | 2 (carbocation) | 3° substrate, polar protic solvent | | SN2 | 1 (backside attack) | 1° substrate, strong nucleophile | | E1 | 2 (carbocation) | 3° substrate, heat | | E2 | 1 (anti-periplanar) | Strong base, heat |

Spectroscopy

  • IR: O-H ~3300 cm⁻¹ (broad), C=O ~1700 cm⁻¹ (sharp)
  • ¹H NMR: Chemical shift reflects electronic environment; splitting follows n+1 rule
  • Mass Spec: Molecular ion peak gives molecular weight

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